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Writing pandas dataframes to file buffers fails with unicode in sample names. Each assembly step will complete, but then writing stats files will fail with:
"Encountered an unexpected error (see ./ipyrad_log.txt)
Error message is below -------------------------------
writelines() argument must be a sequence of strings"
To reproduce:
Edit any of the simulated barcodes files and swap one of the letters for ö. Run steps.
Writing pandas dataframes to file buffers fails with unicode in sample names. Each assembly step will complete, but then writing stats files will fail with:
To reproduce:
Edit any of the simulated barcodes files and swap one of the letters for ö. Run steps.
Useful/related:
pandas-dev/pandas#680
https://stackoverflow.com/questions/38786936/pandas-convert-unicode-strings-to-string
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