Visualizations of atomic systems with Atomic Simulation Environment
Use optimization.ipynb or optimization.py to run a simple optimization of a metallic nanocluster on a metallic support (using an EMT potential):
Use periodic_tsne_khot.py or periodic_tsne_subplots to create 2d, static visualizations of trends in the periodic table, particularly groups, using various embeddings like T-SNE and elemental encodings:
