Wrangling short-read sequencing data for import into SILO

Rapid Viral Variant Exploration and Detection - Interactive WebApp

smallgenomeutilities is a collection of Python scripts to convert alignments between different reference genomes.

A method for embedding and clustering of tumor mutation trees.

BSSE COVID-19 sequencing of test swab samples

Procedure used for the surveillance of SARS-CoV-2, RSV and Influenza genomic variants in wastewater.

WISE Loculus with V-Pipe – Infra for start-to-end viral wastewater analysis.