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567 Open 1,069 Closed
567 Open 1,069 Closed
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Issues list

Map molfile monomers onto library monomers on import Export to MOL Bucket: Export to MOL related issues Import from MOL
#2958 opened May 28, 2025 by ljubica-milovic Refined Backlog
Expand c api to return CIP labels
#2952 opened May 27, 2025 by jblack-mestre
1
System should consider any collection of monomers and atoms who are connected via covalent (backbone, sidechain, monomer to small molecule, small molecule to small molecule), or hydrogen bonds as the whole chain Flex mode Bucket: Flex canvas related mode Priority: Medium Severity: Medium Medium level visibility to the user
#2946 opened May 23, 2025 by AlexeyGirin Indigo-1.32.0-rc.2
1
System doesn't calculate melting temperature for unsplit nucleotides if they are more then two Priority: Medium Severity: Medium Medium level visibility to the user
#2938 opened May 21, 2025 by AlexeyGirin
Make pKa value calculation available via API call Indigo API
#2935 opened May 21, 2025 by AlexeyGirin Indigo-1.34.0-rc.1 (current)
Isoelectric Point calculation formula seems to be wrong Priority: High Severity: High High level visibility to the user
#2929 opened May 20, 2025 by AlexeyGirin Indigo-1.34.0-rc.1 (current)
@even1024
Isoelectric Point calculation should take into account occupied leaving groups (exclude them) Priority: Medium Severity: Medium Medium level visibility to the user
#2928 opened May 20, 2025 by AlexeyGirin Indigo-1.34.0-rc.1 (current)
Atom weights in indigo should be updated according to last IUPAC data Priority: Medium Severity: Medium Medium level visibility to the user
#2926 opened May 20, 2025 by AlexeyGirin Indigo-1.34.0-rc.1 (current)
1
Molecule mass should be calculated for partial selected micromolecule Macro-Micro Bucket: Switching between Micro and Macro modes Priority: High Severity: High High level visibility to the user
#2924 opened May 20, 2025 by AlexeyGirin Indigo-1.33.0-rc.1
@even1024
System doesn't substract from mass of monomer mass of leaving group atom(s) if an attachment point is occupied. Priority: High Severity: High High level visibility to the user
#2923 opened May 20, 2025 by AlexeyGirin Indigo-1.33.0-rc.1
@even1024
Performing an exact match search results in PostgreSQL termination User`s Feedback
#2922 opened May 19, 2025 by amhuhn2
1
The Import of saved inchiKey file doesn't work for Multiple s-group molecules Priority: Medium
#2916 opened May 12, 2025 by NadezhdaPeskun Refined Backlog
CIP labels are always rendered from cdxml User`s Feedback
#2900 opened May 12, 2025 by jblack-mestre
Saving expanded monomers into MOL-files Test Cases Written Test cases has been written for that issue
#2894 opened May 8, 2025 by even1024 Indigo-1.34.0-rc.1 (current)
@even1024
Reaction data support in KET-format Test Cases Written Test cases has been written for that issue
#2893 opened May 8, 2025 by even1024 Indigo-1.34.0-rc.1 (current)
@even1024
Structure View should include the header regardless of the imports file. Export to SDF Bucket: Export to SDF related issues Macro-Micro Bucket: Switching between Micro and Macro modes Priority: Low
#2898 opened May 6, 2025 by NadezhdaPeskun Indigo-1.34.0-rc.1 (current)
Paste from clipboard in sequence mode should work the same as in Flex/Snake mode Ljubica found bugs Bucket: Bugs found by Ljubica on her daily routine Priority: Medium Sequence mode Bucket: Sequence mode related issues Severity: High High level visibility to the user
#2899 opened May 6, 2025 by AlexeyGirin Indigo-1.34.0-rc.1 (current)
1
test
#2865 opened Apr 22, 2025 by AlexeyGirin
Bingo NoSQL substructure search is not working
#2864 opened Apr 22, 2025 by Seva-Vaskin
We still need to produce a more meaningful error like xxx was not recognized as a valid SMILES string HELM Bucket: Bugs related to Export to HELM format Priority: High Severity: High High level visibility to the user
#2837 opened Mar 27, 2025 by AlexeyGirin Refined Backlog
Support for PNG Format
#2780 opened Feb 20, 2025 by Jelica1
Clean Up function doesn't work if query atom and monomer on the canvas at the same time Layout Priority: Medium Severity: Medium Medium level visibility to the user
#2724 opened Jan 6, 2025 by AlexeyGirin Refined Backlog
The monomer appears expanded after loading file in RXN V2000 format Export to RXN Bucket: Export to RXN related issues Priority: Medium Severity: Medium Medium level visibility to the user
#2723 opened Jan 6, 2025 by Zhirnoff Refined Backlog
Reaction SMILES lossily handles enhanced stereochemistry Export to SMARTS Bucket: Bugs related to Export to SMARTS Stereochemistry Bucket: Stereochemistry related issues User`s Feedback
#2720 opened Jan 2, 2025 by dan2097 Indigo-1.33.0-rc.1
1
@even1024
2
Mismatch in Oxygen Atom Mapping Between Reactants and Product in Indigo Automapping User`s Feedback
#2719 opened Dec 31, 2024 by RamziWeslati
2
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