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Pull requests: nf-core/rnaseq

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Pull requests list

Important! Template update for nf-core/tools v3.3.2
#1580 opened Jul 8, 2025 by nf-core-bot Loading…
[GH-1572] Fix salmon.merged.SummarizedExperiment.rds name collision
#1573 opened Jun 20, 2025 by GallVp Loading…
2 of 11 tasks
1
2
issue #1570 show only umi_dedup.sorted.log in multiqc report
#1571 opened Jun 17, 2025 by idot Loading…
Correct typos in rnaseq DE analysis docs
#1569 opened Jun 10, 2025 by johnvusich Loading…
2 tasks done
Update to Nextflow 25.04
#1566 opened Jun 9, 2025 by bentsherman • Draft
2
ARM Megatests
#1529 opened Mar 26, 2025 by edmundmiller Loading…
@edmundmiller
11
Container configs
#1515 opened Mar 17, 2025 by edmundmiller Loading…
@edmundmiller
12
Try matthias' fix to download
#1439 opened Oct 23, 2024 by pinin4fjords • Draft
11 tasks
2
allow integer sample names
#1421 opened Oct 18, 2024 by idot Loading…
1 task
8
Update nextflow_schema.json
#1397 opened Oct 2, 2024 by rraadd88 Loading…
1 of 11 tasks
2
Copy optimized resources from Tower
#1209 opened Feb 6, 2024 by edmundmiller • Draft
@edmundmiller
3
Add NGSCheckMate Ready for review
#993 opened Mar 31, 2023 by SPPearce Loading…
6 of 9 tasks
9
ProTip! Adding no:label will show everything without a label.