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ENH: Detect values for EulerNumber interface #3173

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Merged
merged 4 commits into from
Feb 24, 2020

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mgxd
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@mgxd mgxd commented Feb 21, 2020

List of changes proposed in this PR (pull-request)

  • Parse freesurfer.utils.EulerNumber output to autodetect values. Currently, mris_euler_number values are written to stderr, but this may not be intended, so we should prioritize stdout.

  • Remove unused out_file output.

  • (Mandatory) I acknowledge that this contribution will be available under the Apache 2 license.

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codecov bot commented Feb 21, 2020

Codecov Report

Merging #3173 into master will not change coverage.
The diff coverage is n/a.

Impacted file tree graph

@@           Coverage Diff           @@
##           master    #3173   +/-   ##
=======================================
  Coverage   64.03%   64.03%           
=======================================
  Files         297      297           
  Lines       39422    39422           
  Branches     5210     5210           
=======================================
  Hits        25244    25244           
  Misses      13138    13138           
  Partials     1040     1040
Flag Coverage Δ
#unittests 64.03% <ø> (ø) ⬆️
Impacted Files Coverage Δ
nipype/interfaces/io.py 50.27% <ø> (ø) ⬆️

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@effigies effigies added this to the 1.5.0 milestone Feb 22, 2020
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LGTM.

Maybe add a test to make sure it reports that fsaverage/surf/lh.pial has Euler number 2?

@effigies effigies mentioned this pull request Feb 23, 2020
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Codecov seems borked, but tests are passing. Merging.

@effigies effigies merged commit 07c840b into nipy:master Feb 24, 2020
@mgxd mgxd deleted the enh/euler-number branch February 24, 2020 14:17
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2 participants