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Improve efficiency of variable matching #736

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Feb 3, 2023
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17 changes: 8 additions & 9 deletions R/csv.R
Original file line number Diff line number Diff line change
Expand Up @@ -852,16 +852,15 @@ remaining_columns_to_read <- function(requested, currently_read, all) {
unread <- requested[!(requested %in% currently_read)]
} else {
all_remaining <- all[!(all %in% currently_read)]
unread <- c()
for (p in requested) {
if (any(all_remaining == p)) {
unread <- c(unread, p)
}
is_unread_element <- startsWith(all_remaining, paste0(p, "["))
if (any(is_unread_element)) {
unread <- c(unread, all_remaining[is_unread_element])
}
# identify exact matches
matched <- as.list(match(requested, all_remaining))
# loop over requests not exactly matched
for (id in which(is.na(matched))) {
matched[[id]] <-
which(startsWith(all_remaining, paste0(requested[id], "[")))
}
# collect all unread variables
unread <- all_remaining[unlist(matched)]
}
if (length(unread)) {
unique(unread)
Expand Down
23 changes: 12 additions & 11 deletions R/utils.R
Original file line number Diff line number Diff line change
Expand Up @@ -18,23 +18,24 @@ is_verbose_mode <- function() {

# used in both fit.R and csv.R for variable filtering
matching_variables <- function(variable_filters, variables) {
not_found <- c()
selected_variables <- c()
for (v in variable_filters) {
selected <- variables == v | startsWith(variables, paste0(v, "["))
selected_variables <- c(selected_variables, variables[selected])
variables <- variables[!selected]
if (!any(selected)) {
not_found <- c(not_found, v)
}
}
# identify exact matches
matched <- as.list(match(variable_filters, variables))
# loop over filters not exactly matched
for (id in which(is.na(matched))) {
# assign all variable names that match the filter as an array
matched[[id]] <-
which(startsWith(variables, paste0(variable_filters[id], "[")))
}
# collect all selected variables
selected_variables <- variables[unlist(matched)]
# collect all filters not found
not_found <- variable_filters[vapply(matched, length, 0L) == 0]
list(
matching = selected_variables,
not_found = not_found
)
}


# checks for OS and hardware ----------------------------------------------

os_is_windows <- function() {
Expand Down