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  1. Droplet-Annotation Droplet-Annotation Public

    Python

  2. voxmerger voxmerger Public

    Spatially invariant integrative voxel embedding for morphologically variable HCR stained samples

    Python

  3. MLO-lab/BoneSPDM MLO-lab/BoneSPDM Public

    A pipeline for analyzing bone sample data using cell coordinates and .ims images, performing spatial transformations, Kernel Density Estimation (KDE), and hierarchical clustering for enhanced spati…

    Jupyter Notebook

  4. MLO-lab/BoneAgeEstimation MLO-lab/BoneAgeEstimation Public

    This project estimates bone age based on spatial features extracted from multiplex images, aiming to relate the spatial remodeling introduced by treatment with the aging process.

    Jupyter Notebook