all close

[rijobro]

Description

allclose function for testing

Status

Ready

Types of changes

• Non-breaking change (fix or new feature that would not break existing functionality).
• Integration tests passed locally by running ./runtests.sh -f -u --net --coverage.
• Quick tests passed locally by running ./runtests.sh --quick --unittests.

[wyli]

thanks!

[wyli]

/build

[rijobro]

Clicking on the blossom-ci error, it takes me to the results for the Torch flip PR. @wyli any ideas? I'm guessing the results aren't private?

[wyli]

Clicking on the blossom-ci error, it takes me to the results for the Torch flip PR. @wyli any ideas? I'm guessing the results aren't private?

I see, thanks for reporting this, the log is automatically associated with a wrong commit hash, looks like it's the current head of dev @madil90. But I think the log itself is correct (error due to dataset downloading issue):

2021-08-24T15:49:02.4621498Z Traceback (most recent call last):
2021-08-24T15:49:02.4622456Z   File "/home/jenkins/agent/workspace/MONAI-premerge/monai/tests/test_lr_finder.py", line 63, in test_lr_finder
2021-08-24T15:49:02.4623181Z     train_ds = MedNISTDataset(
2021-08-24T15:49:02.4624105Z   File "/home/jenkins/agent/workspace/MONAI-premerge/monai/monai/apps/datasets.py", line 88, in __init__
2021-08-24T15:49:02.4625067Z     download_and_extract(self.resource, tarfile_name, root_dir, self.md5)
2021-08-24T15:49:02.4626160Z   File "/home/jenkins/agent/workspace/MONAI-premerge/monai/monai/apps/utils.py", line 272, in download_and_extract
2021-08-24T15:49:02.4627114Z     download_url(url=url, filepath=filename, hash_val=hash_val, hash_type=hash_type, progress=progress)
2021-08-24T15:49:02.4628242Z   File "/home/jenkins/agent/workspace/MONAI-premerge/monai/monai/apps/utils.py", line 164, in download_url
2021-08-24T15:49:02.4629112Z     gdown.download(url, tmp_name, quiet=not progress)
2021-08-24T15:49:02.4629970Z   File "/usr/local/lib/python3.8/dist-packages/gdown/download.py", line 114, in download
2021-08-24T15:49:02.4630641Z     res = sess.get(url, headers=headers, stream=True)
2021-08-24T15:49:02.4631529Z   File "/usr/local/lib/python3.8/dist-packages/requests/sessions.py", line 555, in get
2021-08-24T15:49:02.4632325Z     return self.request('GET', url, **kwargs)
2021-08-24T15:49:02.4633145Z   File "/usr/local/lib/python3.8/dist-packages/requests/sessions.py", line 542, in request
2021-08-24T15:49:02.4633787Z     resp = self.send(prep, **send_kwargs)
2021-08-24T15:49:02.4634751Z   File "/usr/local/lib/python3.8/dist-packages/requests/sessions.py", line 677, in send
2021-08-24T15:49:02.4635383Z     history = [resp for resp in gen]
2021-08-24T15:49:02.4636238Z   File "/usr/local/lib/python3.8/dist-packages/requests/sessions.py", line 677, in <listcomp>
2021-08-24T15:49:02.4637744Z     history = [resp for resp in gen]
2021-08-24T15:49:02.4638687Z   File "/usr/local/lib/python3.8/dist-packages/requests/sessions.py", line 237, in resolve_redirects
2021-08-24T15:49:02.4639367Z     resp = self.send(
2021-08-24T15:49:02.4640197Z   File "/usr/local/lib/python3.8/dist-packages/requests/sessions.py", line 655, in send
2021-08-24T15:49:02.4640888Z     r = adapter.send(request, **kwargs)
2021-08-24T15:49:02.4641775Z   File "/usr/local/lib/python3.8/dist-packages/requests/adapters.py", line 514, in send
2021-08-24T15:49:02.4642469Z     raise SSLError(e, request=request)
2021-08-24T15:49:02.4645492Z requests.exceptions.SSLError: HTTPSConnectionPool(host='doc-04-ao-docs.googleusercontent.com', port=443): Max retries exceeded with url: /docs/securesc/9p9r8gsv21p6f08r3o04if3gqrtqv1s2/l22nt5odgarfjm30ljfpp48lbutjkn7c/1629819225000/00176608654401740282/00986226090714311076Z/1QsnnkvZyJPcbRoV_ArW8SnE1OTuoVbKE?e=download (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: unable to get local issuer certificate (_ssl.c:1131)')))

[wyli]

/build